|MSU v6.0 Oryza sativa genome assembly||
Release 6.0 of the MSU oryza sativa Nipponbare genome
|NCBI Taxonomy Tree Import||
Used to import NCBI taxonomy details for organisms in this database.
|Whole Genome Assembly v1.0 and Annotation of Tripalus databasica|
|KEGG analysis of Tripalus databasica v1.0 proteins||
Tripalus databasica protein sequences were uploaded to the KEGG / KASS server at http://www.genome.ad.jp/tools/kaas/. The SBH method was selected under the category "Complete or Draft Genome" and all eukaryotic organisms were used. Results were downloaded in the heir.tar.gz heirarchy file and uploaded to the website.
|InterProScan analysis of Tripalus databasica v1.0 transcripts||
InterProScan was executed using the Blast2GO program. Results were saved in XML format and uploaded to the site.
|Blast2GO analysis of Tripalus databasica v1.0 transcripts||
Ran Blast2GO to assign Gene Ontology terms. Blasted against SwissProt and used InterProScan
|Blast vs ExPASy SwissProt of Tripalus databasica v1.0 transcripts||
Blast was executed using the Blast2GO program. Results were saved in XML format and uploaded to the site.